BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C09SP1|AL424939
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig564 1310 0.0
3x_Contig208 174 4e-43
>3x_Contig564
Length = 2733
Score = 1310 bits (656), Expect = 0.0
Identities = 772/814 (94%), Gaps = 5/814 (0%)
Strand = Plus / Minus
Query: 191 cgagatgagacgagatgagattgtacgttttctatttgaratatgatttttttcatttca 250
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 2698 cgagatgagacgagatgagattgtacgttttctatttgaaatatgaggtttttcatttca 2639
Query: 251 cttttgtcaagtacgaagtatttttttttcttatggggccatagtaaagaatttgacgag 310
|||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||||
Sbjct: 2638 cttttgtcaagtacgaagaatgggtttgtcttatgaggccatagtaaagaatttgacgag 2579
Query: 311 cgtcaggragccatagatgatatgttagactatattgatgcctggraatttgaggatagg 370
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2578 cgtcaggaagccatagatgatatgttagactatattgatgcctggaaatttgaggatagg 2519
Query: 371 tggttgcgattagcacttttaggagggatgatgattatagtcccggttcttgccattaat 430
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 2518 tggttgcgattagcacttttaggagggatgatgattatagtcccgggtcttgccagtaag 2459
Query: 431 actgaataavaaaaaacatgtgagcacaatatataagacagcattctggtcatcaaaact 490
||||||| | ||||||| ||||||| | |||||||||||||||||||||||||||||
Sbjct: 2458 actgaattaattaaaacatttgagcacgttttataagacagcattctggtcatcaaaact 2399
Query: 491 ccaagaacagaaatccactaaaatgatataatactgtracctcagtaaggtccgaracca 550
|||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 2398 ccaagaacagaaatccacgaaaatgagataatactgtaacctcagtaaggtccgaaacca 2339
Query: 551 aatgggagaatgtttccaatattttccactggtacattagtatcaatttgatacattatg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2338 aatgggagaatgtttccaatattttccactggtacattagtatcaatttgatacattatg 2279
Query: 611 aagagtactcacgtgaccatcgtccactatgattttcgatctcatcgttgatctctgaga 670
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2278 aagagtactcacgtgaccatcgtccactatgattttcgatctcatcgttgatctctgaaa 2219
Query: 671 agaragasaaaaaatttcgaaaaagagatttgaacacacaaatcgttaaaaccaaaagtt 730
||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2218 agaaagaaaaaaaatttcgaaaaagagatttgaacacacaaatcgtttaaaccaaaagtt 2159
Query: 731 cagtcatacgaatttgcacacacatacggaaggragatttcaaccaa-ttct---tccgt 786
||||||||||||||| ||||||||||||||||| ||||||||||||| |||| || ||
Sbjct: 2158 cagtcatacgaattttcacacacatacggaaggaagatttcaaccaagttctgtctctgt 2099
Query: 787 gtactattattacagcaggcctccctttctgatagccataagatataagaagaactcaaa 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2098 gtactattattacagcaggcctccctttctgatagccataagatataagaagaactcaaa 2039
Query: 847 aagcaaaacagtatgagtgctgacaacggggtgaaagtcgttgcggasagggtacaagat 906
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2038 aagcaaaacagtatgagtgctgacaacggggtgaaagtcgttgcggagcaggtacaagat 1979
Query: 907 ttgt-ccttggcaggtgagaacaaggctgttgaagctcaagctgagaaaccactagtgaa 965
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1978 ttgtgccttggcaggtgagaacaaggctgttgaagctcaagctgagaaaccactagtgaa 1919
Query: 966 taagaaagaaaagaagaaggrgaagcacaatggt 999
|||||||||||||||||||| |||||||||||||
Sbjct: 1918 taagaaagaaaagaagaaggagaagcacaatggt 1885
>3x_Contig208
Length = 1357
Score = 174 bits (87), Expect = 4e-43
Identities = 110/114 (96%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 1 acctcagttatgcttggtgctattattttatctctgtcggtgatttcataactcgg-gct 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 114 acctcagttatgcttggtgctattattttatctctgtcggtgatttcataactcggtgct 55
Query: 60 ggaat-ccttgaaaaaagg--aagtgtatctgcagtttcaacttccgaaagcat 110
||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 54 ggaatcccttgaaaaaaggaaaagtgtatctgcagtttcaacttccgaaagcat 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8919
Number of Sequences: 1807
Number of extensions: 8919
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 2
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)